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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
23
ATAC-seq
2
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
Assay category
44
Transcription
25
DNA accessibility
Date released
188
August, 2017
159
July, 2018
104
May, 2022
72
September, 2018
70
February, 2023
63
May, 2021
55
November, 2019
53
October, 2018
52
October, 2019
41
April, 2018
32
February, 2021
24
June, 2019
19
December, 2017
19
September, 2020
17
July, 2019
15
March, 2020
11
September, 2017
10
November, 2020
8
August, 2021
8
January, 2021
7
August, 2020
7
May, 2019
7
November, 2018
6
December, 2019
6
November, 2017
5
March, 2019
5
October, 2017
3
August, 2018
3
October, 2022
1
August, 2022
1
February, 2020
1
June, 2018
Available data
37
fastq
12
bed narrowPeak
2
tsv
Organism
69
Homo sapiens
Biosample type
37
primary cell
32
tissue
1
cell line
Organ
56
pancreas
52
epithelium
36
heart
35
artery
35
blood vessel
35
vasculature
31
eye
14
connective tissue
8
bone element
8
skeleton
1
adipose tissue
1
brain
Project
37
HPAP
18
T1D
15
AMP
Genome assembly (visualization)
12
hg19
Lab
37
Klaus Kaestner, Upenn
18
Kyle Gaulton, UCSD
15
AMP-T2D consortium
files.file_type!
hdf5
BIOSAMPLE
ASSAY
70 results
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Clear Filters
total RNA-seq
ATAC-seq
snATAC-seq
CRISPR genome editing followed by sgRNA sequencing
primary cell
pancreatic alpha cell
27
pancreatic beta cell
10
tissue
islet of Langerhans
5
11
2
pigmented layer of retina
2
12
cell line
EndoC_BH1
1
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