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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
total RNA-seq
23
ATAC-seq
2
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
Assay category
42
Transcription
25
DNA accessibility
Date released
104
May, 2022
99
August, 2017
68
February, 2023
51
October, 2018
50
October, 2019
46
September, 2018
35
November, 2019
24
June, 2019
21
May, 2021
19
December, 2017
19
September, 2020
11
September, 2017
10
July, 2019
10
November, 2020
9
March, 2020
8
January, 2021
7
August, 2020
7
August, 2021
7
May, 2019
7
November, 2018
6
November, 2017
5
March, 2019
5
October, 2017
4
July, 2018
3
October, 2022
1
August, 2022
Available data
37
fastq
12
bed narrowPeak
tsv
Organism
67
Homo sapiens
Biosample type
37
primary cell
30
tissue
1
cell line
Organ
56
pancreas
50
epithelium
36
heart
35
artery
35
blood vessel
35
vasculature
27
eye
14
connective tissue
8
bone element
8
skeleton
1
adipose tissue
1
brain
Project
37
HPAP
18
T1D
13
AMP
Genome assembly (visualization)
12
hg19
Lab
37
Klaus Kaestner, Upenn
18
Kyle Gaulton, UCSD
13
AMP-T2D consortium
files.file_type!
tsv
BIOSAMPLE
ASSAY
68 results
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total RNA-seq
ATAC-seq
snATAC-seq
CRISPR genome editing followed by sgRNA sequencing
primary cell
pancreatic alpha cell
27
pancreatic beta cell
10
tissue
islet of Langerhans
5
11
2
pigmented layer of retina
12
cell line
EndoC_BH1
1
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