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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
Hi-C
Assay category
3
3D chromatin structure
Date released
2
July, 2019
1
October, 2019
Available data
790
bam
712
bigWig
499
fastq
438
tsv
292
bed narrowPeak
145
bigBed narrowPeak
80
zippedFastqFolder
50
bed bed3+
43
bed broadPeak
29
bigBed broadPeak
23
tagAlign
12
bed bedMethyl
12
bigBed bedMethyl
9
hic
8
bedpe bed3+
6
txt
3
cool
3
hdf5
1
bedpe
1
tar
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
cell line
Organ
3
brain
2
blood vessel
2
epithelium
2
vasculature
1
connective tissue
1
liver
1
pancreas
Project
3
AMP
Genome assembly (visualization)
3
hg19
1
GRCh38
Lab
3
AMP-T2D consortium
Audit category:
1
inconsistent assembly
month_released!
June, 2018
BIOSAMPLE
ASSAY
3 results
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Hi-C
primary cell
brain microvascular endothelial cell
1
endothelial cell of hepatic sinusoid
1
cell line
Panc1
1
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