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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ChIP-seq
2
Capture-C
1
Hi-C
1
total RNA-seq
Assay category
4
DNA binding
1
3D chromatin structure
1
Transcription
Target of assay
3
histone
3
histone modification
2
narrow histone mark
1
broad histone mark
1
control
Date released
188
August, 2017
159
July, 2018
104
May, 2022
72
September, 2018
70
February, 2023
63
May, 2021
55
November, 2019
53
October, 2018
53
October, 2019
41
April, 2018
32
February, 2021
24
June, 2019
19
December, 2017
19
July, 2019
19
September, 2020
15
March, 2020
11
September, 2017
10
November, 2020
8
August, 2021
8
January, 2021
7
August, 2020
7
May, 2019
7
November, 2018
6
December, 2019
6
November, 2017
5
March, 2019
5
October, 2017
3
August, 2018
3
October, 2022
1
August, 2022
1
February, 2020
1
June, 2018
Available data
4
bam
4
tagAlign
3
bed bed3+
3
bed narrowPeak
3
bigWig
1
bedpe bed3+
1
tsv
Organism
8
Homo sapiens
Biosample type
4
primary cell
2
cell line
2
tissue
Organ
130
kidney
92
heart
35
liver
8
embryo
6
blood vessel
6
epithelium
6
vasculature
5
connective tissue
4
pancreas
2
artery
1
adipose tissue
Project
8
AMP
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
6
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
8 results
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Clear Filters
ChIP-seq
Capture-C
Hi-C
total RNA-seq
primary cell
hepatocyte
4
cell line
EndoC_BH1
2
tissue
islet of Langerhans
1
1
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