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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
ChIP-seq
Assay category
93
DNA binding
Target of assay
181
histone
181
histone modification
93
broad histone mark
88
narrow histone mark
65
control
29
transcription factor
12
RNA binding protein
7
recombinant protein
5
nucleotide modification
Date released
32
August, 2017
19
October, 2018
17
September, 2018
10
April, 2019
7
October, 2019
6
November, 2019
2
May, 2019
Available data
88
bigWig
85
bam
83
bed narrowPeak
52
fastq
42
bigBed narrowPeak
8
bed broadPeak
8
tagAlign
6
bed bed3+
Organism
89
Homo sapiens
Biosample type
51
tissue
32
primary cell
10
cell line
Organ
78
pancreas
70
brain
45
blood vessel
45
vasculature
44
connective tissue
44
epithelium
42
liver
37
heart
34
limb
20
adipose tissue
20
musculature of body
16
nerve
15
kidney
14
artery
9
vein
4
embryo
4
spleen
Project
93
AMP
Genome assembly (visualization)
88
hg19
84
GRCh38
Lab
93
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
22
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
93 results
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ChIP-seq
tissue
islet of Langerhans
14
body of pancreas
11
kidney
10
endocrine pancreas
8
pancreas
8
primary cell
pancreatic endocrine cell
11
pancreatic ductal cell
6
pancreatic acinar cell
4
epithelial cell of proximal tubule
3
pancreatic alpha cell
3
+ See 2 more…
cell line
EndoC_BH1
6
Panc1
4
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