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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
85
ChIP-seq
Assay category
85
DNA binding
Target of assay
166
histone
166
histone modification
85
broad histone mark
81
narrow histone mark
62
control
28
transcription factor
12
RNA binding protein
7
recombinant protein
5
nucleotide modification
Date released
24
August, 2017
19
October, 2018
17
September, 2018
10
April, 2019
7
October, 2019
6
November, 2019
2
May, 2019
Available data
88
bigWig
85
bam
83
bed narrowPeak
52
fastq
42
bigBed narrowPeak
8
bed broadPeak
tagAlign
6
bed bed3+
Organism
85
Homo sapiens
Biosample type
43
tissue
32
primary cell
10
cell line
Organ
70
pancreas
57
heart
45
blood vessel
45
vasculature
43
epithelium
34
limb
32
connective tissue
25
brain
24
liver
16
adipose tissue
16
nerve
15
kidney
14
artery
12
musculature of body
9
vein
4
embryo
4
spleen
Project
85
AMP
Genome assembly (visualization)
80
GRCh38
80
hg19
Lab
85
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
22
missing controlled_by
Audit category:
3
inconsistent control read length
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
85 results
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Clear Filters
ChIP-seq
tissue
body of pancreas
11
islet of Langerhans
10
kidney
10
endocrine pancreas
8
pancreas
4
primary cell
pancreatic endocrine cell
11
pancreatic ductal cell
6
pancreatic acinar cell
4
epithelial cell of proximal tubule
3
pancreatic alpha cell
3
+ See 2 more…
cell line
EndoC_BH1
6
Panc1
4
See all biosamples
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