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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
410
total RNA-seq
284
ChIP-seq
160
ATAC-seq
74
single cell RNA-seq
52
WGBS
44
DNase-seq
13
Hi-C
11
snATAC-seq
10
MeRIP-seq
2
Capture-C
2
FAIRE-seq
2
RRBS
2
small RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
pCHi-C
Assay category
52
DNA methylation
Date released
41
May, 2022
6
February, 2021
4
November, 2018
1
July, 2019
Available data
41
zippedFastqFolder
10
fastq
6
tsv
5
bam
5
bed bedMethyl
5
bigBed bedMethyl
5
bigWig
Organism
52
Homo sapiens
Biosample type
47
primary cell
5
tissue
Organ
51
pancreas
47
epithelium
8
heart
6
adipose tissue
6
connective tissue
5
liver
2
blood vessel
2
spleen
2
vasculature
1
limb
1
musculature of body
Project
47
HPAP
5
AMP
Genome assembly (visualization)
5
GRCh38
Lab
47
Klaus Kaestner, Upenn
5
AMP-T2D consortium
BIOSAMPLE
ASSAY
52 results
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WGBS
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
tissue
body of pancreas
2
pancreas
2
muscle of leg
1
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