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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
770
ChIP-seq
592
total RNA-seq
175
ATAC-seq
75
single cell RNA-seq
56
WGBS
14
DNase-seq
13
Hi-C
11
snATAC-seq
10
MeRIP-seq
5
small RNA-seq
4
RRBS
4
pCHi-C
2
Capture-C
2
FAIRE-seq
2
STARR-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
whole genome sequencing assay
Assay category
14
DNA accessibility
Date released
6
June, 2019
5
November, 2018
2
August, 2017
1
October, 2019
Available data
13
bam
13
bed narrowPeak
13
bigBed narrowPeak
13
bigWig
12
bed bed3+
12
bed broadPeak
12
bigBed broadPeak
6
fastq
Organism
14
Homo sapiens
Biosample type
11
tissue
2
primary cell
1
cell line
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
9
connective tissue
8
pancreas
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
14
AMP
Genome assembly (visualization)
13
GRCh38
11
hg19
Lab
14
AMP-T2D consortium
BIOSAMPLE
ASSAY
14 results
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DNase-seq
tissue
body of pancreas
4
liver
2
pancreas
2
right lobe of liver
2
islet of Langerhans
1
primary cell
hepatic stellate cell
1
hepatocyte
1
cell line
Panc1
1
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