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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ATAC-seq
8
ChIP-seq
1
DNase-seq
Assay category
23
DNA accessibility
8
DNA binding
Target of assay
8
histone
8
histone modification
4
broad histone mark
4
narrow histone mark
Date released
14
September, 2018
9
June, 2019
5
September, 2017
3
August, 2017
Available data
258
fastq
207
bam
203
bigWig
110
tsv
80
zippedFastqFolder
77
bed narrowPeak
31
bigBed narrowPeak
3
bedpe bed3+
3
cool
3
hic
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
Organism
31
Homo sapiens
Biosample type
100
tissue
31
primary cell
7
cell line
Organ
61
epithelium
22
pancreas
21
vasculature
17
blood vessel
16
kidney
15
connective tissue
13
vein
11
brain
9
musculature of body
6
heart
3
eye
2
liver
Project
31
AMP
Genome assembly (visualization)
31
GRCh38
31
hg19
Lab
31
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
BIOSAMPLE
ASSAY
31 results
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ATAC-seq
ChIP-seq
DNase-seq
primary cell
pancreatic beta cell
7
skeletal muscle satellite cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
skeletal muscle cell
1
1
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