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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
403
total RNA-seq
218
ChIP-seq
152
ATAC-seq
74
single cell RNA-seq
51
WGBS
26
DNase-seq
11
snATAC-seq
10
MeRIP-seq
9
Hi-C
2
Capture-C
2
FAIRE-seq
2
RRBS
2
small RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
pCHi-C
Assay category
26
DNA accessibility
Date released
22
June, 2019
2
November, 2018
1
August, 2017
1
October, 2019
Available data
26
bam
26
bed narrowPeak
26
bigBed narrowPeak
26
bigWig
25
bed bed3+
25
bed broadPeak
25
bigBed broadPeak
3
fastq
Organism
26
Homo sapiens
Biosample type
25
tissue
1
cell line
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
9
connective tissue
8
pancreas
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
26
AMP
Genome assembly (visualization)
26
GRCh38
24
hg19
Lab
26
AMP-T2D consortium
BIOSAMPLE
ASSAY
26 results
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DNase-seq
tissue
renal pelvis
10
body of pancreas
4
left renal pelvis
4
right renal pelvis
4
pancreas
2
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cell line
Panc1
1
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