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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
3
MeRIP-seq
Assay category
21
DNA binding
Target of assay
78
histone
78
histone modification
41
narrow histone mark
37
broad histone mark
24
control
3
nucleotide modification
2
transcription factor
1
RNA binding protein
Date released
12
August, 2017
6
October, 2019
3
November, 2020
2
November, 2019
1
May, 2021
Available data
21
bam
12
fastq
1
tagAlign
Organism
24
Homo sapiens
Biosample type
tissue
12
primary cell
11
cell line
1
in vitro differentiated cells
Organ
62
liver
30
epithelium
24
pancreas
11
connective tissue
7
embryo
6
blood
6
bodily fluid
6
brain
6
kidney
6
vasculature
5
blood vessel
4
heart
2
artery
2
musculature of body
2
vein
1
eye
Project
24
AMP
Lab
21
AMP-T2D consortium
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
5
inconsistent ontology term
biosample_type!
tissue
BIOSAMPLE
ASSAY
24 results
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ChIP-seq
MeRIP-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
cell line
Panc1
6
EndoC_BH1
2
3
in vitro differentiated cells
pancreatic PP cell
1
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