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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
144
ChIP-seq
Assay category
144
DNA binding
Target of assay
144
histone
144
histone modification
74
broad histone mark
70
narrow histone mark
47
control
19
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
66
August, 2017
32
September, 2018
30
October, 2018
10
November, 2019
October, 2019
3
March, 2020
2
May, 2021
1
May, 2019
Available data
136
bigWig
130
bam
121
bed narrowPeak
100
fastq
43
bigBed narrowPeak
15
tagAlign
12
bed bed3+
12
bed broadPeak
Organism
138
Homo sapiens
Biosample type
73
tissue
58
primary cell
12
cell line
1
in vitro differentiated cells
Organ
144
pancreas
110
brain
97
liver
77
connective tissue
72
epithelium
57
heart
38
vasculature
37
blood vessel
33
musculature of body
32
adipose tissue
22
kidney
12
embryo
6
limb
6
spleen
2
artery
1
blood
1
bodily fluid
1
eye
Project
140
AMP
4
T1D
Genome assembly (visualization)
136
hg19
130
GRCh38
Lab
144
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
Audit category:
48
missing controlled_by
Audit category:
9
inconsistent control read length
1
inconsistent assembly
month_released!
October, 2019
BIOSAMPLE
ASSAY
144 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
30
body of pancreas
17
endocrine pancreas
14
pancreas
12
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
pancreatic alpha cell
7
pancreatic beta cell
7
cell line
EndoC_BH1
12
in vitro differentiated cells
pancreatic PP cell
1
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