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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
103
ChIP-seq
Assay category
103
DNA binding
Target of assay
103
histone
103
histone modification
56
broad histone mark
53
control
47
narrow histone mark
13
transcription factor
8
RNA binding protein
5
nucleotide modification
Date released
50
August, 2017
30
October, 2018
10
November, 2019
7
October, 2019
3
March, 2020
2
May, 2021
1
May, 2019
Available data
94
bed narrowPeak
94
bigWig
89
bam
52
fastq
49
bigBed narrowPeak
15
tagAlign
12
bed broadPeak
8
bed bed3+
Organism
97
Homo sapiens
Biosample type
69
tissue
19
cell line
14
primary cell
1
in vitro differentiated cells
Organ
183
brain
103
pancreas
102
liver
78
connective tissue
72
epithelium
71
vasculature
70
blood vessel
62
heart
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
11
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
99
AMP
4
T1D
Genome assembly (visualization)
94
hg19
88
GRCh38
Lab
103
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
Audit category:
missing controlled_by
Audit category:
9
inconsistent control read length
1
inconsistent assembly
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
103 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
26
body of pancreas
17
endocrine pancreas
14
pancreas
12
cell line
EndoC_BH1
12
Panc1
7
primary cell
pancreatic alpha cell
7
pancreatic beta cell
7
in vitro differentiated cells
pancreatic PP cell
1
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