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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
DNase-seq
76
ATAC-seq
64
single cell RNA-seq
60
total RNA-seq
53
ChIP-seq
6
snATAC-seq
4
RRBS
3
snDrop-seq
2
RNA microarray
2
STARR-seq
2
pCHi-C
1
FAIRE-seq
1
Hi-C
1
small RNA-seq
Assay category
53
DNA binding
Target of assay
31
histone
31
histone modification
16
narrow histone mark
15
broad histone mark
12
control
10
transcription factor
7
recombinant protein
3
RNA binding protein
Date released
23
April, 2019
22
October, 2019
5
May, 2019
3
June, 2019
Available data
53
bam
40
bed narrowPeak
40
bigWig
24
bigBed narrowPeak
1
tagAlign
Organism
53
Homo sapiens
Biosample type
28
tissue
15
primary cell
10
cell line
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
129
epithelium
102
vasculature
99
blood vessel
94
heart
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
53
AMP
Genome assembly (visualization)
40
GRCh38
40
hg19
Lab
53
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
BIOSAMPLE
ASSAY
53 results
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ChIP-seq
tissue
kidney
27
pituitary gland
1
primary cell
epithelial cell of proximal tubule
10
kidney epithelial cell
5
cell line
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
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