Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
103
ChIP-seq
61
total RNA-seq
47
ATAC-seq
11
DNase-seq
6
single cell RNA-seq
5
Hi-C
2
WGBS
1
FAIRE-seq
1
RRBS
1
pCHi-C
Assay category
103
DNA binding
Target of assay
72
histone
72
histone modification
45
broad histone mark
27
narrow histone mark
22
control
9
transcription factor
5
RNA binding protein
Date released
50
May, 2019
41
October, 2019
6
February, 2021
6
November, 2017
Available data
103
bam
80
bigWig
76
bed narrowPeak
71
bigBed narrowPeak
7
tagAlign
6
bed broadPeak
6
bigBed broadPeak
6
fastq
Organism
103
Homo sapiens
Biosample type
74
tissue
23
primary cell
6
cell line
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
134
heart
129
epithelium
102
vasculature
99
blood vessel
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
103
AMP
Genome assembly (visualization)
80
hg19
76
GRCh38
Lab
103
AMP-T2D consortium
organ_slims!
bone element
BIOSAMPLE
ASSAY
103 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
tibial artery
23
ascending aorta
16
thoracic aorta
16
aorta
13
coronary artery
5
+ See 1 more…
primary cell
endothelial cell of umbilical vein
17
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
cell line
smooth muscle cell of the coronary artery
6
See all biosamples
Download