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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
53
ATAC-seq
25
ChIP-seq
4
DNase-seq
Assay category
57
DNA accessibility
54
Transcription
25
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
72
February, 2021
35
February, 2023
21
October, 2019
3
July, 2019
3
May, 2019
2
June, 2019
Available data
101
bam
85
bigWig
82
bed narrowPeak
54
tsv
25
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
Organism
136
Homo sapiens
Biosample type
70
tissue
64
cell line
2
primary cell
Organ
635
pancreas
566
connective tissue
531
liver
424
adipose tissue
294
epithelium
266
heart
217
brain
205
kidney
191
vasculature
187
blood vessel
128
artery
96
limb
66
bone element
54
blood
54
bodily fluid
53
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
136
AMP
Genome assembly (visualization)
136
GRCh38
105
hg19
Lab
136
AMP-T2D consortium
BIOSAMPLE
ASSAY
136 results
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total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
tissue
coronary artery
36
3
2
tibial artery
1
18
2
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
+ See 5 more…
cell line
smooth muscle cell of the coronary artery
52
8
4
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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