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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ATAC-seq
8
snATAC-seq
6
ChIP-seq
4
total RNA-seq
Assay category
21
DNA accessibility
6
DNA binding
4
Transcription
Target of assay
6
control
Date released
8
February, 2021
8
February, 2023
8
January, 2021
3
January, 2019
3
November, 2018
1
January, 2018
Available data
68
bam
62
bed narrowPeak
60
fastq
55
bigWig
bigBed narrowPeak
4
bed bed3
4
txt
Organism
31
Homo sapiens
Biosample type
16
tissue
8
primary cell
7
cell line
Organ
855
pancreas
656
connective tissue
481
adipose tissue
448
epithelium
433
liver
259
heart
250
kidney
159
bone element
159
brain
153
vasculature
151
blood vessel
116
artery
55
eye
49
musculature of body
38
limb
37
embryo
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
9
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
23
AMP
8
T1D
Genome assembly (visualization)
13
hg19
8
GRCh38
Lab
23
AMP-T2D consortium
8
Kyle Gaulton, UCSD
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
31 results
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ATAC-seq
snATAC-seq
ChIP-seq
total RNA-seq
tissue
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
distal epiphysis
1
+ See 7 more…
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
1
6
See all biosamples
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