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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ATAC-seq
10
snATAC-seq
9
single cell RNA-seq
4
total RNA-seq
1
ChIP-seq
1
pCHi-C
Assay category
23
DNA accessibility
13
Transcription
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
19
April, 2020
8
February, 2021
8
February, 2023
2
October, 2019
1
March, 2020
Available data
9
bam
9
bed narrowPeak
4
bed bed3
4
txt
1
bigWig
1
tagAlign
1
tsv
Organism
37
Homo sapiens
Biosample type
38
tissue
Organ
946
pancreas
791
liver
684
connective tissue
524
epithelium
491
adipose tissue
393
heart
354
kidney
286
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
19
AMP
19
LungMap
Genome assembly (visualization)
13
hg19
9
GRCh38
Lab
19
AMP-T2D consortium
19
Xin Sun, UCSD
organ_slims!
esophagus
BIOSAMPLE
ASSAY
38 results
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ATAC-seq
snATAC-seq
single cell RNA-seq
total RNA-seq
ChIP-seq
pCHi-C
tissue
lung
10
9
1
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
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