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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ATAC-seq
13
ChIP-seq
2
WGBS
1
DNase-seq
1
pCHi-C
Assay category
14
DNA accessibility
13
DNA binding
2
DNA methylation
Target of assay
6
histone
6
histone modification
4
broad histone mark
4
control
3
other context
3
other post-translational modification
3
transcription factor
2
narrow histone mark
Date released
9
November, 2018
8
February, 2021
December, 2018
7
January, 2019
4
February, 2023
1
March, 2020
1
October, 2017
Available data
25
bam
19
bed narrowPeak
17
fastq
13
bigWig
10
bigBed narrowPeak
4
bed bed3
txt
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
30
Homo sapiens
Biosample type
30
tissue
Organ
940
pancreas
790
liver
684
connective tissue
524
epithelium
491
adipose tissue
393
heart
292
kidney
286
brain
236
vasculature
230
blood vessel
141
artery
122
limb
95
musculature of body
71
bone element
61
eye
43
nerve
42
blood
42
bodily fluid
37
embryo
22
vein
20
lung
18
spleen
18
ureter
12
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
30
AMP
Genome assembly (visualization)
23
hg19
21
GRCh38
Lab
30
AMP-T2D consortium
month_released!
December, 2018
files.file_type!
txt
BIOSAMPLE
ASSAY
30 results
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ATAC-seq
ChIP-seq
WGBS
DNase-seq
pCHi-C
tissue
spleen
1
13
2
1
1
acetabular part of hip bone
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
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