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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
8
ATAC-seq
2
DNase-seq
1
FAIRE-seq
Assay category
11
DNA accessibility
10
DNA binding
Target of assay
10
histone
10
histone modification
5
broad histone mark
5
narrow histone mark
Date released
13
October, 2019
8
February, 2021
Available data
28
bam
21
bed narrowPeak
15
bigWig
13
bigBed narrowPeak
4
bed bed3
4
bed broadPeak
4
bigBed broadPeak
4
txt
2
bed bed3+
2
hic
1
bedpe bed3+
1
tar
Organism
21
Homo sapiens
Biosample type
13
primary cell
8
tissue
Organ
441
liver
214
pancreas
203
brain
183
kidney
151
epithelium
151
heart
133
vasculature
129
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
21
AMP
Genome assembly (visualization)
21
hg19
20
GRCh38
Lab
21
AMP-T2D consortium
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
10
2
1
tissue
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
proximal epiphysis
1
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