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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
Assay category
94
DNA binding
Target of assay
175
histone
175
histone modification
94
broad histone mark
81
narrow histone mark
64
control
19
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
32
August, 2017
20
October, 2019
19
October, 2018
17
September, 2018
6
November, 2019
Available data
89
bigWig
86
bam
84
bed narrowPeak
52
fastq
46
bigBed narrowPeak
8
bed broadPeak
8
tagAlign
6
bed bed3+
Organism
90
Homo sapiens
Biosample type
57
tissue
27
primary cell
10
cell line
Organ
78
pancreas
70
brain
57
heart
45
blood vessel
45
vasculature
44
connective tissue
44
epithelium
42
liver
34
limb
20
adipose tissue
20
musculature of body
16
nerve
15
kidney
14
artery
9
vein
4
embryo
4
spleen
0
skin of body
Project
94
AMP
Genome assembly (visualization)
89
hg19
85
GRCh38
Lab
94
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
22
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
94 results
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ChIP-seq
tissue
tibial nerve
16
islet of Langerhans
14
body of pancreas
11
endocrine pancreas
8
pancreas
8
primary cell
pancreatic endocrine cell
11
pancreatic ductal cell
6
pancreatic acinar cell
4
pancreatic alpha cell
3
pancreatic beta cell
3
cell line
EndoC_BH1
6
Panc1
4
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