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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
1
FAIRE-seq
1
pCHi-C
Assay category
15
DNA binding
3D chromatin structure
1
DNA accessibility
Target of assay
13
histone
13
histone modification
7
broad histone mark
6
narrow histone mark
2
control
Date released
16
October, 2019
1
March, 2020
Available data
20
bam
15
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
1
tar
1
tsv
Organism
17
Homo sapiens
Biosample type
16
primary cell
1
tissue
Organ
916
pancreas
724
liver
673
connective tissue
494
epithelium
488
adipose tissue
360
heart
275
kidney
236
brain
214
vasculature
212
blood vessel
159
bone element
137
artery
82
limb
69
blood
69
bodily fluid
57
eye
44
musculature of body
41
nerve
37
embryo
24
spleen
20
lung
16
skeleton
16
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
17
AMP
Genome assembly (visualization)
11
hg19
10
GRCh38
Lab
17
AMP-T2D consortium
files.file_type!
bed broadPeak
assay_slims!
3D chromatin structure
BIOSAMPLE
ASSAY
17 results
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Clear Filters
ChIP-seq
FAIRE-seq
pCHi-C
primary cell
endothelial cell of umbilical vein
15
1
tissue
small intestine
1
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