Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
2
Hi-C
1
FAIRE-seq
1
pCHi-C
Assay category
15
DNA binding
2
3D chromatin structure
1
DNA accessibility
Target of assay
13
histone
13
histone modification
7
broad histone mark
6
narrow histone mark
2
control
Date released
17
October, 2019
2
March, 2020
Available data
20
bam
15
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
hic
1
bedpe bed3+
1
tar
1
tsv
Organism
19
Homo sapiens
Biosample type
18
primary cell
1
tissue
Organ
925
pancreas
728
liver
674
connective tissue
502
epithelium
488
adipose tissue
363
heart
276
kidney
239
brain
219
vasculature
217
blood vessel
159
bone element
137
artery
86
limb
69
blood
bodily fluid
57
eye
50
musculature of body
41
nerve
37
embryo
24
spleen
20
lung
18
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
19
AMP
Genome assembly (visualization)
13
hg19
10
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bed broadPeak
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
19 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
Hi-C
FAIRE-seq
pCHi-C
primary cell
endothelial cell of umbilical vein
15
2
1
tissue
small intestine
1
Download