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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
2
DNase-seq
2
Hi-C
1
FAIRE-seq
1
pCHi-C
Assay category
8
DNA binding
3
DNA accessibility
2
3D chromatin structure
Target of assay
15
histone
15
histone modification
broad histone mark
6
narrow histone mark
2
control
Date released
12
October, 2019
2
March, 2020
Available data
11
bam
8
bed narrowPeak
8
bigBed narrowPeak
8
bigWig
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
hic
1
bedpe bed3+
1
tar
1
tsv
Organism
14
Homo sapiens
Biosample type
13
primary cell
1
tissue
Organ
868
pancreas
749
liver
640
connective tissue
480
epithelium
471
adipose tissue
339
kidney
316
heart
216
brain
191
vasculature
185
blood vessel
159
bone element
127
artery
88
limb
76
musculature of body
69
blood
69
bodily fluid
61
eye
33
embryo
27
nerve
21
spleen
20
lung
18
ureter
16
skeleton
13
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
14
AMP
Genome assembly (visualization)
10
hg19
7
GRCh38
Lab
14
AMP-T2D consortium
Audit category:
1
audit script error
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
14 results
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Clear Filters
ChIP-seq
DNase-seq
Hi-C
FAIRE-seq
pCHi-C
primary cell
endothelial cell of umbilical vein
8
2
2
1
tissue
small intestine
1
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