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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
ATAC-seq
2
WGBS
1
DNase-seq
1
pCHi-C
Assay category
21
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
8
control
7
histone
7
histone modification
6
transcription factor
4
broad histone mark
3
narrow histone mark
3
other context
3
other post-translational modification
Date released
9
November, 2018
7
December, 2018
7
January, 2019
1
March, 2020
1
October, 2019
Available data
24
bam
23
fastq
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tagAlign
1
tsv
Organism
25
Homo sapiens
Biosample type
25
tissue
Organ
794
pancreas
768
liver
659
connective tissue
485
adipose tissue
421
epithelium
306
heart
282
brain
279
kidney
190
vasculature
184
blood vessel
147
bone element
114
limb
96
artery
95
musculature of body
68
blood
68
bodily fluid
42
nerve
37
embryo
33
eye
24
spleen
22
vein
20
lung
18
ureter
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
25
AMP
Genome assembly (visualization)
16
GRCh38
14
hg19
Lab
25
AMP-T2D consortium
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
25 results
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ChIP-seq
WGBS
DNase-seq
pCHi-C
tissue
spleen
20
2
1
1
pituitary gland
1
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