Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
ATAC-seq
4
total RNA-seq
2
WGBS
1
DNase-seq
1
pCHi-C
Assay category
16
DNA binding
4
Transcription
2
DNA methylation
1
DNA accessibility
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
9
November, 2018
7
December, 2018
4
February, 2023
3
January, 2019
1
March, 2020
Available data
19
bam
19
fastq
11
bigWig
9
bed narrowPeak
9
bigBed narrowPeak
4
txt
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
24
Homo sapiens
Biosample type
24
tissue
Organ
726
liver
716
pancreas
615
connective tissue
465
adipose tissue
377
epithelium
289
heart
264
kidney
212
brain
147
bone element
145
vasculature
139
blood vessel
82
artery
80
limb
75
musculature of body
68
blood
68
bodily fluid
33
embryo
33
eye
26
nerve
20
lung
20
spleen
18
ureter
13
vein
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
24
AMP
Genome assembly (visualization)
11
GRCh38
9
hg19
Lab
24
AMP-T2D consortium
assay_title!
ATAC-seq
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
24 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
WGBS
DNase-seq
pCHi-C
tissue
spleen
16
2
1
1
acetabular part of hip bone
1
ilium
1
ischium
1
pubis
1
Download