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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
19
DNase-seq
WGBS
ATAC-seq
1
pCHi-C
Assay category
20
DNA binding
19
DNA accessibility
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
18
June, 2019
7
December, 2018
7
January, 2019
7
November, 2018
1
March, 2020
Available data
39
bam
31
bed narrowPeak
31
bigBed narrowPeak
31
bigWig
21
fastq
19
bed bed3+
19
bed broadPeak
19
bigBed broadPeak
1
tsv
Organism
40
Homo sapiens
Biosample type
40
tissue
Organ
763
liver
743
pancreas
653
connective tissue
479
adipose tissue
374
epithelium
338
heart
282
brain
279
kidney
188
vasculature
182
blood vessel
147
bone element
113
limb
96
artery
94
musculature of body
68
blood
68
bodily fluid
42
nerve
37
embryo
33
eye
22
spleen
22
vein
20
lung
18
ureter
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
40
AMP
Genome assembly (visualization)
31
GRCh38
31
hg19
Lab
40
AMP-T2D consortium
assay_title!
ATAC-seq
WGBS
BIOSAMPLE
ASSAY
40 results
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Clear Filters
ChIP-seq
DNase-seq
pCHi-C
tissue
spleen
20
1
1
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
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