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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
pCHi-C
Assay category
17
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
other post-translational modification
2
narrow histone mark
Date released
7
December, 2018
7
January, 2019
6
November, 2018
1
October, 2017
Available data
21
bam
21
fastq
13
bigWig
11
bed narrowPeak
10
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
21
Homo sapiens
Biosample type
21
tissue
Organ
945
pancreas
786
liver
679
connective tissue
524
epithelium
489
adipose tissue
352
kidney
350
heart
284
brain
235
vasculature
229
blood vessel
158
bone element
141
artery
122
limb
95
musculature of body
69
blood
69
bodily fluid
57
eye
43
nerve
37
embryo
22
vein
21
spleen
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
21
AMP
Genome assembly (visualization)
13
GRCh38
11
hg19
Lab
21
AMP-T2D consortium
assay_title!
pCHi-C
target.investigated_as!
other post-translational modification
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
tissue
spleen
17
2
1
1
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