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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
46
ATAC-seq
37
ChIP-seq
5
DNase-seq
2
WGBS
Assay category
54
Transcription
51
DNA accessibility
37
DNA binding
2
DNA methylation
Target of assay
26
histone
26
histone modification
18
broad histone mark
11
transcription factor
8
narrow histone mark
3
other context
3
other post-translational modification
1
RNA binding protein
Date released
64
February, 2021
35
February, 2023
21
October, 2019
6
January, 2019
6
November, 2018
3
December, 2018
3
July, 2019
3
May, 2019
2
June, 2019
1
October, 2017
Available data
109
bam
101
bigWig
88
bed narrowPeak
54
tsv
38
bigBed narrowPeak
16
fastq
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
4
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
Organism
144
Homo sapiens
Biosample type
78
tissue
64
cell line
2
primary cell
Organ
635
pancreas
566
connective tissue
531
liver
424
adipose tissue
294
epithelium
226
heart
217
brain
205
kidney
191
vasculature
187
blood vessel
128
artery
96
limb
66
bone element
54
blood
54
bodily fluid
53
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
144
AMP
Genome assembly (visualization)
144
GRCh38
107
hg19
Lab
144
AMP-T2D consortium
BIOSAMPLE
ASSAY
144 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
WGBS
tissue
coronary artery
36
3
2
tibial artery
1
18
2
spleen
1
12
1
2
cell line
smooth muscle cell of the coronary artery
52
8
4
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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