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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
2
WGBS
1
ATAC-seq
1
pCHi-C
Assay category
13
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
6
histone
6
histone modification
4
broad histone mark
4
control
3
other context
3
other post-translational modification
3
transcription factor
2
narrow histone mark
Date released
8
November, 2018
December, 2018
7
January, 2019
1
March, 2020
1
October, 2017
Available data
17
bam
17
fastq
13
bigWig
11
bed narrowPeak
10
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
17
Homo sapiens
Biosample type
17
tissue
Organ
925
pancreas
727
liver
674
connective tissue
502
epithelium
488
adipose tissue
363
heart
276
kidney
239
brain
219
vasculature
217
blood vessel
159
bone element
137
artery
86
limb
57
eye
50
musculature of body
42
blood
42
bodily fluid
41
nerve
37
embryo
20
lung
18
vein
17
spleen
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
17
AMP
Genome assembly (visualization)
12
GRCh38
10
hg19
Lab
17
AMP-T2D consortium
files.file_type!
bed broadPeak
month_released!
December, 2018
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
WGBS
ATAC-seq
pCHi-C
tissue
spleen
13
2
1
1
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