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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
1
total RNA-seq
Assay category
12
DNA binding
2
DNA accessibility
2
DNA methylation
1
Transcription
Target of assay
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
6
January, 2019
6
November, 2018
3
December, 2018
1
July, 2019
1
October, 2017
Available data
25
bam
24
fastq
17
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
3
bed bedMethyl
3
bigBed bedMethyl
2
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
17
Homo sapiens
Biosample type
16
tissue
1
primary cell
Organ
623
pancreas
622
liver
570
connective tissue
425
adipose tissue
301
epithelium
222
brain
184
heart
155
vasculature
150
blood vessel
131
kidney
91
limb
85
artery
68
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
29
embryo
18
ureter
16
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
Project
17
AMP
Genome assembly (visualization)
17
GRCh38
15
hg19
Lab
17
AMP-T2D consortium
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
total RNA-seq
tissue
spleen
12
2
1
1
primary cell
pericardium fibroblast
1
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