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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
pCHi-C
Assay category
20
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
9
November, 2018
7
December, 2018
7
January, 2019
1
October, 2017
Available data
24
bam
24
fastq
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
24
Homo sapiens
Biosample type
24
tissue
Organ
724
pancreas
717
liver
675
connective tissue
489
adipose tissue
366
epithelium
350
heart
284
brain
235
vasculature
229
blood vessel
161
kidney
158
bone element
141
artery
122
limb
95
musculature of body
61
blood
61
bodily fluid
57
eye
43
nerve
37
embryo
24
spleen
22
vein
18
ureter
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
24
AMP
Genome assembly (visualization)
16
GRCh38
14
hg19
Lab
24
AMP-T2D consortium
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
24 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
tissue
spleen
20
2
1
1
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