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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
2
WGBS
1
pCHi-C
Assay category
13
DNA binding
2
DNA methylation
Target of assay
6
histone
6
histone modification
4
broad histone mark
4
control
3
other context
3
other post-translational modification
3
transcription factor
2
narrow histone mark
Date released
8
November, 2018
December, 2018
7
January, 2019
1
March, 2020
October, 2017
Available data
16
bam
16
fastq
12
bigWig
10
bed narrowPeak
10
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
bigBed broadPeak
1
tsv
Organism
16
Homo sapiens
Biosample type
16
tissue
Organ
934
pancreas
727
liver
674
connective tissue
502
epithelium
488
adipose tissue
363
heart
276
kidney
232
brain
219
vasculature
217
blood vessel
159
bone element
137
artery
86
limb
63
musculature of body
57
eye
42
blood
42
bodily fluid
41
nerve
37
embryo
20
lung
18
vein
16
skeleton
16
spleen
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
16
AMP
Genome assembly (visualization)
11
GRCh38
9
hg19
Lab
16
AMP-T2D consortium
month_released!
October, 2017
December, 2018
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
16 results
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Clear Filters
ChIP-seq
WGBS
pCHi-C
tissue
spleen
13
2
1
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