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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
8
snATAC-seq
2
WGBS
1
ATAC-seq
1
pCHi-C
Assay category
14
DNA binding
9
DNA accessibility
2
DNA methylation
Target of assay
14
control
Date released
8
January, 2021
8
November, 2018
4
December, 2018
4
January, 2019
1
January, 2018
1
March, 2020
Available data
84
bam
84
fastq
71
bigWig
bed narrowPeak
67
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
26
Homo sapiens
Biosample type
11
tissue
8
primary cell
7
cell line
Organ
732
pancreas
609
connective tissue
478
adipose tissue
373
epithelium
350
liver
202
heart
171
kidney
151
bone element
103
vasculature
101
blood vessel
83
brain
67
artery
36
musculature of body
30
limb
28
eye
23
embryo
20
lung
16
nerve
15
blood
15
bodily fluid
11
spleen
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
18
AMP
8
T1D
Genome assembly (visualization)
2
GRCh38
1
hg19
Lab
18
AMP-T2D consortium
8
Kyle Gaulton, UCSD
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
26 results
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Clear Filters
ChIP-seq
snATAC-seq
WGBS
ATAC-seq
pCHi-C
tissue
spleen
8
2
1
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
6
1
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