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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
2
ATAC-seq
2
WGBS
1
DNase-seq
Assay category
80
DNA binding
3
DNA accessibility
2
DNA methylation
Target of assay
57
transcription factor
14
control
10
RNA binding protein
10
chromatin remodeller
7
histone
7
histone modification
4
broad histone mark
3
narrow histone mark
3
other context
3
other post-translational modification
Date released
34
December, 2018
25
January, 2019
24
November, 2018
1
January, 2018
March, 2020
1
October, 2017
Available data
84
bam
84
fastq
71
bigWig
68
bed narrowPeak
67
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
85
Homo sapiens
Biosample type
61
cell line
24
tissue
primary cell
Organ
774
liver
643
connective tissue
586
pancreas
488
adipose tissue
373
heart
316
kidney
263
brain
196
blood vessel
196
vasculature
158
bone element
139
artery
122
limb
113
epithelium
77
musculature of body
61
blood
61
bodily fluid
56
eye
43
nerve
37
embryo
24
spleen
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
lymph node
1
pericardium
1
skin of body
1
spinal cord
1
thymus
Project
85
AMP
Genome assembly (visualization)
70
GRCh38
69
hg19
Lab
85
AMP-T2D consortium
Audit category:
1
inconsistent control
month_released!
March, 2020
biosample_type!
primary cell
BIOSAMPLE
ASSAY
85 results
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Clear Filters
ChIP-seq
ATAC-seq
WGBS
DNase-seq
cell line
GM12878
60
1
tissue
spleen
20
1
2
1
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