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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
DNase-seq
6
ChIP-seq
Assay category
17
DNA accessibility
6
DNA binding
Target of assay
4
histone
4
histone modification
2
RNA binding protein
2
broad histone mark
2
narrow histone mark
2
transcription factor
Date released
14
June, 2019
4
November, 2017
4
October, 2019
1
November, 2018
Available data
341
bam
317
bigWig
281
fastq
165
bed narrowPeak
157
tsv
89
bigBed narrowPeak
80
zippedFastqFolder
23
bed broadPeak
23
bigBed broadPeak
22
bed bed3+
8
bed bedMethyl
8
bigBed bedMethyl
7
tagAlign
6
hic
5
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
23
Homo sapiens
Biosample type
22
primary cell
1
tissue
Organ
78
kidney
63
liver
38
brain
36
limb
33
musculature of body
30
heart
22
epithelium
18
ureter
17
vasculature
13
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
23
AMP
Genome assembly (visualization)
21
GRCh38
17
hg19
Lab
23
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
23 results
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DNase-seq
ChIP-seq
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
+ See 8 more…
tissue
spleen
1
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