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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
114
ChIP-seq
Assay category
166
Transcription
114
DNA binding
79
DNA accessibility
12
DNA methylation
3
3D chromatin structure
Target of assay
68
histone
68
histone modification
41
broad histone mark
28
control
27
narrow histone mark
18
transcription factor
6
RNA binding protein
3
other context
3
other post-translational modification
Date released
57
April, 2019
21
May, 2019
7
December, 2018
7
January, 2019
6
February, 2021
6
November, 2018
5
June, 2019
5
October, 2019
Available data
113
bam
86
bed narrowPeak
86
bigWig
76
bigBed narrowPeak
20
fastq
6
tagAlign
Organism
114
Homo sapiens
Biosample type
103
tissue
6
cell line
5
primary cell
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
129
epithelium
102
vasculature
99
blood vessel
94
heart
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
114
AMP
Genome assembly (visualization)
86
hg19
85
GRCh38
Lab
114
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
114 results
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ChIP-seq
tissue
heart left ventricle
35
spleen
20
heart
14
heart right ventricle
13
right atrium auricular region
10
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cell line
smooth muscle cell of the coronary artery
6
primary cell
cardiac fibroblast
5
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