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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
Assay category
75
DNA accessibility
51
DNA binding
12
Transcription
4
DNA methylation
1
3D chromatin structure
Target of assay
36
histone
36
histone modification
19
broad histone mark
17
narrow histone mark
15
transcription factor
7
recombinant protein
3
other context
3
other post-translational modification
2
RNA binding protein
Date released
18
April, 2019
15
October, 2019
6
January, 2019
4
May, 2019
3
December, 2018
3
November, 2018
2
June, 2019
Available data
51
bam
51
bed narrowPeak
51
bigWig
36
bigBed narrowPeak
12
fastq
Organism
51
Homo sapiens
Biosample type
32
tissue
12
primary cell
7
cell line
Organ
429
liver
163
pancreas
123
brain
101
epithelium
79
vasculature
76
blood vessel
76
connective tissue
74
heart
54
blood
54
bodily fluid
48
limb
39
kidney
27
musculature of body
25
artery
24
nerve
19
adipose tissue
15
embryo
12
spleen
12
vein
2
eye
1
pituitary gland
Project
51
AMP
Genome assembly (visualization)
51
GRCh38
51
hg19
Lab
51
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
BIOSAMPLE
ASSAY
51 results
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ChIP-seq
tissue
kidney
20
spleen
12
primary cell
epithelial cell of proximal tubule
8
kidney epithelial cell
4
cell line
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
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