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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
37
DNase-seq
9
ATAC-seq
4
total RNA-seq
3
WGBS
Assay category
59
DNA binding
46
DNA accessibility
4
Transcription
3
DNA methylation
Target of assay
53
histone
53
histone modification
38
broad histone mark
15
narrow histone mark
6
transcription factor
3
other context
3
other post-translational modification
Date released
52
October, 2019
32
June, 2019
6
February, 2021
6
January, 2019
6
November, 2018
5
May, 2019
3
December, 2018
1
July, 2019
1
October, 2017
Available data
112
bam
106
bigWig
105
bed narrowPeak
96
bigBed narrowPeak
37
bed bed3+
37
bed broadPeak
37
bigBed broadPeak
16
fastq
4
tsv
3
bed bedMethyl
3
bigBed bedMethyl
Organism
112
Homo sapiens
Biosample type
112
tissue
Organ
634
pancreas
566
connective tissue
531
liver
424
adipose tissue
294
epithelium
266
heart
217
brain
205
kidney
191
vasculature
187
blood vessel
128
artery
96
limb
66
bone element
54
blood
54
bodily fluid
53
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
112
AMP
Genome assembly (visualization)
112
GRCh38
110
hg19
Lab
112
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
3D chromatin structure
BIOSAMPLE
ASSAY
112 results
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ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
WGBS
tissue
tibial nerve
24
2
1
4
tibial artery
18
2
1
muscle of leg
5
13
1
muscle of arm
17
spleen
12
1
1
2
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