Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
86
ChIP-seq
DNase-seq
9
ATAC-seq
7
total RNA-seq
4
Hi-C
WGBS
1
pCHi-C
Assay category
86
DNA binding
9
DNA accessibility
7
Transcription
4
3D chromatin structure
Target of assay
55
histone
55
histone modification
38
broad histone mark
25
control
17
narrow histone mark
6
transcription factor
3
other context
3
other post-translational modification
Date released
65
October, 2019
7
December, 2018
7
January, 2019
7
May, 2019
6
February, 2021
6
November, 2018
4
July, 2019
3
February, 2020
1
March, 2020
1
October, 2017
Available data
98
bam
69
bed narrowPeak
67
bigWig
60
bigBed narrowPeak
21
fastq
8
tsv
Organism
107
Homo sapiens
Biosample type
107
tissue
Organ
887
pancreas
780
liver
669
connective tissue
483
adipose tissue
458
epithelium
355
heart
273
kidney
254
brain
223
vasculature
219
blood vessel
159
bone element
137
artery
85
limb
69
blood
69
bodily fluid
62
musculature of body
57
eye
41
nerve
37
embryo
22
spleen
20
lung
20
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
107
AMP
Genome assembly (visualization)
73
hg19
72
GRCh38
Lab
107
AMP-T2D consortium
assay_title!
DNase-seq
WGBS
BIOSAMPLE
ASSAY
107 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
pCHi-C
tissue
tibial nerve
35
1
5
tibial artery
23
1
1
spleen
20
1
1
muscle of leg
7
gastrocnemius medialis
1
4
+ See 7 more…
See all biosamples
Download