Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
79
ChIP-seq
37
DNase-seq
9
ATAC-seq
4
Hi-C
3
WGBS
1
pCHi-C
Assay category
79
DNA binding
46
DNA accessibility
Transcription
4
3D chromatin structure
3
DNA methylation
Target of assay
55
histone
55
histone modification
38
broad histone mark
21
control
17
narrow histone mark
3
other context
3
other post-translational modification
3
transcription factor
Date released
65
October, 2019
32
June, 2019
9
November, 2018
December, 2018
7
January, 2019
7
May, 2019
6
February, 2021
5
July, 2019
1
March, 2020
1
October, 2017
Available data
127
bam
103
bed narrowPeak
100
bigWig
94
bigBed narrowPeak
37
bed bed3+
37
bed broadPeak
37
bigBed broadPeak
17
fastq
3
bed bedMethyl
3
bigBed bedMethyl
1
tsv
Organism
133
Homo sapiens
Biosample type
133
tissue
Organ
597
liver
467
pancreas
323
epithelium
262
brain
229
kidney
227
heart
203
connective tissue
169
vasculature
163
blood vessel
115
limb
97
bone element
90
adipose tissue
87
musculature of body
83
artery
42
blood
42
bodily fluid
42
eye
38
nerve
23
embryo
22
vein
18
spleen
18
ureter
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
133
AMP
Genome assembly (visualization)
105
GRCh38
103
hg19
Lab
133
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
December, 2018
assay_slims!
Transcription
BIOSAMPLE
ASSAY
133 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
Hi-C
WGBS
pCHi-C
tissue
tibial nerve
35
2
1
tibial artery
23
2
1
muscle of leg
7
13
1
spleen
13
1
1
2
1
muscle of arm
17
+ See 10 more…
See all biosamples
Download