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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
ChIP-seq
37
DNase-seq
4
total RNA-seq
3
ATAC-seq
3
WGBS
Assay category
57
DNA binding
40
DNA accessibility
4
Transcription
3
DNA methylation
Target of assay
54
histone
54
histone modification
38
broad histone mark
16
narrow histone mark
3
other context
3
other post-translational modification
3
transcription factor
Date released
52
October, 2019
32
June, 2019
6
January, 2019
6
May, 2019
6
November, 2018
December, 2018
1
July, 2019
1
October, 2017
Available data
131
bam
104
bigWig
103
bed narrowPeak
94
bigBed narrowPeak
37
bed bed3+
37
bed broadPeak
37
bigBed broadPeak
17
fastq
8
tsv
3
bed bedMethyl
3
bigBed bedMethyl
Organism
104
Homo sapiens
Biosample type
104
tissue
Organ
623
pancreas
622
liver
570
connective tissue
425
adipose tissue
301
epithelium
224
heart
222
brain
155
vasculature
150
blood vessel
131
kidney
91
limb
85
artery
68
musculature of body
58
bone element
31
nerve
29
embryo
28
blood
28
bodily fluid
18
ureter
15
vein
13
spleen
6
eye
1
pericardium
1
pituitary gland
Project
104
AMP
Genome assembly (visualization)
103
GRCh38
101
hg19
Lab
104
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
December, 2018
BIOSAMPLE
ASSAY
104 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
WGBS
tissue
tibial nerve
24
2
4
1
tibial artery
18
2
1
muscle of leg
6
13
1
muscle of arm
17
spleen
9
1
1
2
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