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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
2
RRBS
2
WGBS
1
ATAC-seq
1
DNase-seq
Assay category
20
DNA binding
4
DNA methylation
2
DNA accessibility
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
9
November, 2018
7
December, 2018
7
January, 2019
2
August, 2017
1
October, 2017
Available data
84
bigWig
81
bam
74
bed narrowPeak
60
bigBed narrowPeak
47
bed broadPeak
35
bed bed3+
34
bigBed broadPeak
26
fastq
15
tagAlign
10
tsv
6
bed bedMethyl
6
bigBed bedMethyl
2
bedpe bed3+
2
hic
1
txt
Organism
26
Homo sapiens
Biosample type
26
tissue
Organ
471
pancreas
465
liver
257
epithelium
101
connective tissue
60
blood
60
bodily fluid
44
adipose tissue
27
embryo
24
spleen
21
brain
6
vasculature
3
blood vessel
2
musculature of body
Project
26
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
26
AMP-T2D consortium
BIOSAMPLE
ASSAY
26 results
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ChIP-seq
RRBS
WGBS
ATAC-seq
DNase-seq
tissue
spleen
20
2
1
1
skeletal muscle tissue
2
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