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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
5
total RNA-seq
3
DNase-seq
2
ATAC-seq
WGBS
1
pCHi-C
Assay category
55
DNA binding
5
DNA accessibility
5
Transcription
Target of assay
30
histone
30
histone modification
20
broad histone mark
19
control
10
narrow histone mark
6
transcription factor
3
other context
3
other post-translational modification
Date released
42
October, 2019
7
December, 2018
7
January, 2019
7
November, 2018
1
February, 2020
1
March, 2020
1
October, 2017
Available data
64
bam
45
bigWig
41
bed narrowPeak
39
bigBed narrowPeak
22
fastq
6
tsv
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
Organism
66
Homo sapiens
Biosample type
66
tissue
Organ
895
pancreas
786
liver
678
connective tissue
485
adipose tissue
477
epithelium
354
kidney
345
heart
286
brain
234
vasculature
228
blood vessel
159
bone element
141
artery
121
limb
95
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
23
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
66
AMP
Genome assembly (visualization)
45
GRCh38
45
hg19
Lab
66
AMP-T2D consortium
assay_title!
WGBS
BIOSAMPLE
ASSAY
66 results
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ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
pCHi-C
tissue
tibial nerve
35
5
2
1
spleen
20
1
1
1
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