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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
total RNA-seq
19
DNase-seq
13
ATAC-seq
12
ChIP-seq
Assay category
58
Transcription
32
DNA accessibility
12
DNA binding
Target of assay
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
66
February, 2021
18
June, 2019
6
January, 2019
4
February, 2023
4
November, 2018
3
December, 2018
1
October, 2017
Available data
98
bam
90
bigWig
58
tsv
40
bed narrowPeak
31
bigBed narrowPeak
19
bed bed3+
19
bed broadPeak
19
bigBed broadPeak
14
fastq
4
bed bed3
Organism
102
Homo sapiens
Biosample type
102
tissue
Organ
658
pancreas
625
liver
589
connective tissue
426
adipose tissue
311
epithelium
188
heart
165
vasculature
164
brain
159
blood vessel
129
kidney
96
limb
93
artery
73
musculature of body
70
bone element
55
blood
55
bodily fluid
34
eye
31
nerve
29
embryo
18
ureter
17
vein
14
spleen
12
skeleton
2
pericardium
1
pituitary gland
Project
102
AMP
Genome assembly (visualization)
102
hg19
100
GRCh38
Lab
102
AMP-T2D consortium
BIOSAMPLE
ASSAY
102 results
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total RNA-seq
DNase-seq
ATAC-seq
ChIP-seq
tissue
bone tissue
58
spleen
1
1
12
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
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