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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
19
DNase-seq
2
WGBS
1
ATAC-seq
1
pCHi-C
Assay category
20
DNA accessibility
20
DNA binding
2
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
18
June, 2019
9
November, 2018
7
December, 2018
7
January, 2019
1
March, 2020
1
October, 2017
Available data
42
bam
34
bigWig
32
bed narrowPeak
31
bigBed narrowPeak
24
fastq
19
bed bed3+
19
bed broadPeak
19
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
tsv
Organism
43
Homo sapiens
Biosample type
43
tissue
Organ
547
connective tissue
505
pancreas
488
adipose tissue
361
liver
299
kidney
273
heart
265
brain
158
bone element
133
blood vessel
133
vasculature
122
limb
82
musculature of body
73
artery
56
eye
43
nerve
25
spleen
20
lung
18
ureter
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
43
AMP
Genome assembly (visualization)
34
GRCh38
32
hg19
Lab
43
AMP-T2D consortium
BIOSAMPLE
ASSAY
43 results
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ChIP-seq
DNase-seq
WGBS
ATAC-seq
pCHi-C
tissue
spleen
20
1
2
1
1
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
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