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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
19
DNase-seq
2
WGBS
1
ATAC-seq
Assay category
20
DNA accessibility
20
DNA binding
2
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
18
June, 2019
9
November, 2018
7
December, 2018
7
January, 2019
March, 2020
1
October, 2017
Available data
42
bam
34
bigWig
32
bed narrowPeak
31
bigBed narrowPeak
24
fastq
19
bed bed3+
19
bed broadPeak
19
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
Organism
42
Homo sapiens
Biosample type
42
tissue
Organ
932
pancreas
788
liver
682
connective tissue
518
epithelium
490
adipose tissue
352
kidney
346
heart
284
brain
232
vasculature
226
blood vessel
159
bone element
141
artery
122
limb
91
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
24
spleen
21
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
bone marrow
1
lymph node
1
skin of body
1
spinal cord
1
thymus
Project
42
AMP
Genome assembly (visualization)
34
GRCh38
32
hg19
Lab
42
AMP-T2D consortium
month_released!
March, 2020
BIOSAMPLE
ASSAY
42 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
ATAC-seq
tissue
spleen
20
1
2
1
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
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