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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
19
DNase-seq
2
WGBS
1
pCHi-C
Assay category
20
DNA binding
19
DNA accessibility
2
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
18
June, 2019
9
November, 2018
7
December, 2018
7
January, 2019
1
March, 2020
October, 2017
Available data
41
bam
33
bigWig
31
bed narrowPeak
31
bigBed narrowPeak
23
fastq
19
bed bed3+
19
bed broadPeak
19
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
tsv
Organism
42
Homo sapiens
Biosample type
42
tissue
Organ
941
pancreas
791
liver
683
connective tissue
524
epithelium
490
adipose tissue
393
heart
354
kidney
270
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
24
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
42
AMP
Genome assembly (visualization)
33
GRCh38
31
hg19
Lab
42
AMP-T2D consortium
organ_slims!
lymph node
month_released!
October, 2017
BIOSAMPLE
ASSAY
42 results
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ChIP-seq
DNase-seq
WGBS
pCHi-C
tissue
spleen
20
1
2
1
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
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