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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
3
DNase-seq
2
Hi-C
1
ATAC-seq
1
FAIRE-seq
Assay category
24
DNA binding
5
DNA accessibility
2
3D chromatin structure
Target of assay
18
histone
18
histone modification
11
broad histone mark
7
narrow histone mark
6
transcription factor
3
other context
3
other post-translational modification
Date released
16
October, 2019
6
January, 2019
4
November, 2018
3
December, 2018
1
March, 2020
1
October, 2017
Available data
29
bam
29
bigWig
27
bed narrowPeak
26
bigBed narrowPeak
14
fastq
5
bed broadPeak
5
bigBed broadPeak
3
bed bed3+
2
hic
1
bedpe bed3+
1
tar
Organism
31
Homo sapiens
Biosample type
17
primary cell
14
tissue
Organ
658
pancreas
625
liver
589
connective tissue
426
adipose tissue
311
epithelium
188
heart
165
vasculature
164
brain
159
blood vessel
129
kidney
96
limb
93
artery
73
musculature of body
70
bone element
55
blood
55
bodily fluid
34
eye
31
nerve
29
embryo
18
ureter
17
vein
14
spleen
12
skeleton
2
pericardium
1
pituitary gland
Project
31
AMP
Genome assembly (visualization)
31
hg19
28
GRCh38
Lab
31
AMP-T2D consortium
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
31 results
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ChIP-seq
DNase-seq
Hi-C
ATAC-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
12
2
2
1
tissue
spleen
12
1
1
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