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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
3
DNase-seq
2
WGBS
1
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
37
DNA binding
5
DNA accessibility
2
DNA methylation
1
3D chromatin structure
Target of assay
21
histone
21
histone modification
13
broad histone mark
10
control
8
narrow histone mark
6
transcription factor
3
other context
3
other post-translational modification
Date released
21
October, 2019
9
November, 2018
7
December, 2018
7
January, 2019
March, 2020
1
October, 2017
Available data
44
bam
31
bigWig
27
bed narrowPeak
26
bigBed narrowPeak
24
fastq
5
bed broadPeak
5
bigBed broadPeak
3
bed bed3+
2
bed bedMethyl
2
bigBed bedMethyl
1
hic
1
tar
Organism
45
Homo sapiens
Biosample type
24
tissue
21
primary cell
Organ
932
pancreas
788
liver
682
connective tissue
518
epithelium
490
adipose tissue
352
kidney
346
heart
284
brain
232
vasculature
226
blood vessel
159
bone element
141
artery
122
limb
91
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
24
spleen
21
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
bone marrow
1
lymph node
1
skin of body
1
spinal cord
1
thymus
Project
45
AMP
Genome assembly (visualization)
30
hg19
28
GRCh38
Lab
45
AMP-T2D consortium
Audit category:
1
audit script error
month_released!
March, 2020
BIOSAMPLE
ASSAY
45 results
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ChIP-seq
DNase-seq
WGBS
ATAC-seq
FAIRE-seq
Hi-C
tissue
spleen
20
1
2
1
primary cell
endothelial cell of umbilical vein
17
2
1
1
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